Kiessling, W., Simpson, C., Beck, B. Mewis, H, & Pandolfi, J.M. 2012. Equatorial decline of reef corals during the last Pleistocene interglacial. PNAS 109: 21378–21383. PDF
Richardson, A. J., Brown, C. J., Brander, K., Bruno, J. F., Buckley, L., Burrows, M. T., Carlos M. Duarte, Benjamin S. Halpern, Ove Hoegh-Guldberg, Johnna Holding, Carrie V. Kappel, Wolfgang Kiessling, Pippa J. Moore, Mary I. O’Connor, John M. Pandolfi, Camille Parmesan, David S. Schoeman, Frank Schwing, William J. Sydeman and Elvira S. Poloczanska (2012). The Pace of Shifting Climate in Marine and Terrestrial Ecosystems. Biology Letters, 8(6): 907-909. PDF
McLeod, E., A. Green, E. Game, K. Anthony, J. Cinner, S. F. Heron, J. Kleypas, C. E. Lovelock, J. M. Pandolfi, R. L. Pressey, R.V. Salm, S. Schill, and C. Woodroffe. 2012. Integrating Climate and Ocean Change Vulnerability into Conservation Planning. Coastal Management 40(6): 651-672. PDF
Bode, M., Connolly, S. and Pandolfi, J.M. 2012. Species differences drive non-neutral structure in Pleistocene coral communities. American Naturalist 180: 577–588. doi:10.1086/667892. PDF
Harnik, Paul G., Heike K. Lotze, Sean C. Anderson, Zoe V. Finkel, Seth Finnegan, David R. Lindberg, Lee Hsiang Liow, Rowan Lockwood, Craig M. McClain, Jenny L. McGuire , John M. Pandolfi, Carl Simpson, Derek P. Tittensor. 2012. Extinctions in ancient and modern seas. Trends in Ecology & Evolution 27: 608-617. PDF
Muhs, DR, JM Pandolfi & KR Simmons. 2012. Sea-level history of past interglacial periods: New evidence from U-series dating of corals from Curaçao, Netherlands Antilles. Quaternary Research 78:157-169. PDF
Reymond, CE, Uthicke, S. & John M. Pandolfi. 2012. Tropical Foraminifera as indicators of water quality and temperature. Proceedings of the 12th International Coral Reef Symposium, Cairns, Australia, 9-13 July 2012 21B Enhancing coral reef resilience through management of water quality, 5 pp. PDF
Reef, R., Pandolfi, J.M., & Lovelock, C.E. 2012. The Effect of Nutrient Enrichment on the Growth and Elemental Stoichiometry of Coral Reef Macroalgae. Ecology & Evolution, p. 1-11. doi: 10.1002/ece3.330 PDF
Bromfield, K. & Pandolfi, J.M. 2012. Regional patterns of evolutionary turnover in Neogene coral reefs from the west-central Indo-Pacific Ocean. Evolutionary Ecology 26: 375-391. PDF
Blower, D. C., Pandolfi, J. M., Bruce, B. D., Gomez-Cabrera, M. del C. & Ovenden, J. R. 2012 Population genetics of Australian white sharks reveals fine-scale spatial structure, transoceanic dispersal events and low effective population sizes. Marine Ecology Progress Series 455:229-244. PDF
Budd, A. F., Nunes, F. L. D., Weil, E. & Pandolfi, J. 2012 Polymorphism in a common Atlantic reef coral (Montastrea cavernosa) and its long-term evolutionary implications. Evolutionary Ecology 26:265-290. PDF
Pandolfi, J.M. & Budd, A.F. 2012. A Festschrift for Jeremy B.C. Jackson and his integration of ecology, evolution, and conservation biology. Evolutionary Ecology 26:227-232. PDF
Burrows, Michael T., David S. Schoeman, Carlos M. Duarte, Mary I. O’Connor, Lauren B. Buckley, Carrie V. Kappel, Camille Parmesan, Benjamin S. Halpern, Chris Brown, Keith M. Brander, John F. Bruno, John M. Pandolfi, William J. Sydeman, Anthony J. 2012 in press. Response to Hulme – Invasive species spread faster than climate change. Science. PDF
Clark, T.R., Zhao, J.x., Feng, Y., Done, T., Jupiter, S., Lough, J., Pandolfi, J.M. 2012. Spatial variability of initial 230Th/232Th in modern Porites from the inshore region of the Great Barrier Reef. Geochimica et Cosmochimica Acta 78: 99–118. PDF