Pandolfi, John M., Connolly, Sean R., Marshall, Dustin J. and Cohen, Anne L. (2011) The future of coral reefs: Response. Science, 334 6062: 1495-1496. PDF
Brown, Christopher J., Schoeman, David S., Sydeman, William J., Brander, Keith, Buckley, Lauren B., Burrows, Michael, Duarte, Carlos M., Moore, Pippa J., Pandolfi, John M., Poloczanska, Elvira, Venables, William and Richardson, Anthony J. (2011) Quantitative approaches in climate change ecology. Global Change Biology, 17 12: 3697-3713. PDF
Burrows, Michael T., Schoeman, David S., Buckley, Lauren B., Moore, Pippa, Poloczanska, Elvira S., Brander, Keith M., Brown, Chris, Bruno, John F., Duarte, Carlos M., Halpern, Benjamin S., Holding, Johnna, Kappel, Carrie V., Kiessling, Wolfgang, O’Connor, Mary I., Pandolfi, John M., Parmesan, Camille, Schwing, Franklin B., Sydeman, William J. and Richardson, Anthony J. (2011) The pace of shifting climate in marine and terrestrial ecosystems. Science, 334 6056: 652-655. PDF
Kittinger, John N., Pandolfi, John M., Blodgett, Jonathan H., Hunt, Terry L., Jiang, Hong, Maly, Kepa, McClenachan, Loren E., Schultz, Jennifer K. and Wilcox, Bruce A. (2011) Historical reconstruction reveals recovery in Hawaiian coral reefs. PLoS One, 6 10: e25460-1-e25460-13. PDF
Reymond, Claire E., Bode, Michael, Renema, Willem and Pandolfi, John (2011) Ecological incumbency impedes stochastic community assembly in Holocene foraminifera from the Huon Peninsula, Papua New Guinea. Paleobiology, 37 4: 670-685. PDF
Hughes, TP, Bellwood, DR, Baird, AH, Brodie, J, Bruno, JF and Pandolfi, JM (2011) Shifting base-lines, declining coral cover, and the erosion of reef resilience: comment on Sweatman et al. (2011). Coral Reefs, 30 3: 653-660. PDF
Reymond, Claire E., Uthicke, S. and Pandolfi, John M. (2011) Inhibited growth in the photosymbiont-bearing foraminifer Marginopora vertebralis from the nearshore Great Barrier Reef, Australia. Marine Ecology: Progress Series, 435 : 97-109. PDF
Pandolfi, John M., Connolly, Sean R., Marshall, Dustin J. and Cohen, Anne A. (2011) Projecting coral reef futures under global warming and ocean acidification. Science, 333 6041: 418-422. PDF
Pandolfi, John M. (2011) Presentation of the 2009 Paleontological Society Medal to Jeremy B. C. Jackson. Journal of Paleontology, 85 3: 599-600.
Bromfield, Kate and Pandolfi, John M. (2011) Regional patterns of evolutionary turnover in Neogene coral reefs from the central Indo-West Pacific Ocean.Evolutionary Ecology, Article in press : 1-17. DOI: 10.1007/s10682-011-9483-9 PDF
Lybolt, Matt, Neil, David, Zhao, Jianxin, Feng, Yuexing, Yu, KeFu and Pandolfi, John (2011) Instability in a marginal coral reef: The shift from natural variability to a human-dominated seascape. Frontiers in Ecology and the Environment, 9 3: 154-160. PDF
Beger, Maria, Babcock, Russ, Booth, David J., Bucher, Daniel, Condie, Scott A., Creese, Bob, Cvitanovic, Christopher, Dalton, Steve J., Harrison, Peter, Hoey, Andrew, Jordan, Alan, Loder, Jennifer, Malcolm, Hamish, Purcell, Steven W., Roelfsema, Chris, Sachs, Patrick, Smith, Stephen D. A., Sommer, Brigitte, Stuart-Smith, Rick, Thomson, Damian, Wallace, Carden C., Zann, Maria and Pandolfi, John M. (2011) Research challenges to improve the management and conservation of subtropical reefs to tackle climate change threats. Ecological Management & Restoration, 12 1: e7-e10. PDF
Budd, Ann F., Nunez, Flavia L. D., Weil, Ernesto and Pandolfi, John M. (2011) Polymorphism in a common Atlantic reef coral (Montastraea cavernosa) and its long-term evolutionary implications. Evolutionary Ecology. DOI: 10.1007/s10682-010-9460-8 PDF
Pandolfi, John M. (2011). Historical ecology of coral reefs. In Hopley, D. (Ed.),Encyclopedia of Modern Coral Reefs: Structure, Form and Process 1 ed. (pp. 554-558) Berlin, Germany: Springer-Verlag.
Pandolfi, John. M. (2011). The paleoecology of coral reefs. In Zvy Dubinsky and Noga Stambler (Ed.), Coral reefs: An ecosystem in transition (pp. 13-24) Springer: Dordrecht, Netherlands.